The Convergence Server

EMD-3121: PGT128 Fab bound to BG505 SOSIP.664 HIV-1 Env trimer

Reported resolution: 4.36 Å

Residue info (805 total residues):
64% good convergence (Cα RMSD <= 1 Å)
32.8% questionable convergence (Cα RMSD 1-3 Å)
3.2% poor convergence (Cα RMSD > 3 Å)

Visualization

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Disclaimer: Refinements and analyses are performed automatically, without user intervention. The results have not been individually assessed or inspected for accuracy. If you notice errors in a processed entry, let us know so that we can improve our pipeline.

Download 10-model ensemble (pdb.gz)

Download per-residue RMSD (txt)

RMSD Histogram

Black bar denotes mean RMSD
All RMSD values greater than 4 are grouped together.


Per-residue RMSD

Chain A



Chain B



Chain H



Chain L



Average RMSD & Reported Resolution

Current entry shown as red dot
EMD-1641 EMD-2660 EMD-2677 EMD-2763 EMD-2764 EMD-2787 EMD-2856 EMD-2857 EMD-2867 EMD-2913 EMD-2924 EMD-2974 EMD-2981 EMD-2984 EMD-3047 EMD-3061 EMD-3062 EMD-3063 EMD-3079 EMD-3099 EMD-3121 EMD-3145 EMD-3146 EMD-3147 EMD-3179 EMD-3180 EMD-3218 EMD-3221 EMD-3231 EMD-3237 EMD-3238 EMD-3239 EMD-3245 EMD-3295 EMD-3296 EMD-3297 EMD-3298 EMD-3299 EMD-3308 EMD-3309 EMD-3331 EMD-3337 EMD-3338 EMD-3353 EMD-3366 EMD-3385 EMD-3388 EMD-3439 EMD-3444 EMD-3446 EMD-3447 EMD-3448 EMD-3449 EMD-3451 EMD-3460 EMD-3488 EMD-3523 EMD-3524 EMD-3525 EMD-3532 EMD-3534 EMD-3535 EMD-3539 EMD-3541 EMD-3583 EMD-3589 EMD-3595 EMD-3601 EMD-3602 EMD-3605 EMD-3622 EMD-3631 EMD-3652 EMD-3695 EMD-3727 EMD-3748 EMD-3765 EMD-3766 EMD-3770 EMD-3776 EMD-3777 EMD-3802 EMD-3805 EMD-3817 EMD-3824 EMD-3842 EMD-3843 EMD-3844 EMD-3908 EMD-4009 EMD-4015 EMD-4032 EMD-4038 EMD-4040 EMD-4053 EMD-4055 EMD-4061 EMD-4063 EMD-4064 EMD-4068 EMD-4071 EMD-4073 EMD-4077 EMD-4080 EMD-4083 EMD-4088 EMD-4093 EMD-4112 EMD-4147 EMD-4148 EMD-4155 EMD-5391 EMD-5623 EMD-5776 EMD-5777 EMD-5778 EMD-5895 EMD-5896 EMD-5995 EMD-6204 EMD-6219 EMD-6225 EMD-6239 EMD-6240 EMD-6267 EMD-6272 EMD-6287 EMD-6324 EMD-6337 EMD-6338 EMD-6343 EMD-6344 EMD-6345 EMD-6346 EMD-6354 EMD-6369 EMD-6404 EMD-6408 EMD-6413 EMD-6414 EMD-6415 EMD-6416 EMD-6417 EMD-6418 EMD-6419 EMD-6420 EMD-6425 EMD-6455 EMD-6458 EMD-6475 EMD-6478 EMD-6479 EMD-6480 EMD-6481 EMD-6526 EMD-6534 EMD-6535 EMD-6536 EMD-6551 EMD-6562 EMD-6563 EMD-6566 EMD-6569 EMD-6570 EMD-6573 EMD-6580 EMD-6617 EMD-6618 EMD-6630 EMD-6631 EMD-6632 EMD-6633 EMD-6634 EMD-6635 EMD-6640 EMD-6656 EMD-6668 EMD-6675 EMD-6676 EMD-6677 EMD-6698 EMD-6699 EMD-6703 EMD-6704 EMD-6705 EMD-6706 EMD-6707 EMD-6710 EMD-6724 EMD-6732 EMD-6733 EMD-6734 EMD-6743 EMD-6744 EMD-6747 EMD-6770 EMD-6771 EMD-6772 EMD-6773 EMD-6774 EMD-6777 EMD-6780 EMD-6788 EMD-6790 EMD-6829 EMD-7018 EMD-7019 EMD-7020 EMD-7040 EMD-7048 EMD-7049 EMD-7050 EMD-7051 EMD-7052 EMD-7063 EMD-8004 EMD-8011 EMD-8012 EMD-8013 EMD-8015 EMD-8069 EMD-8072 EMD-8117 EMD-8118 EMD-8119 EMD-8124 EMD-8136 EMD-8138 EMD-8162 EMD-8163 EMD-8164 EMD-8165 EMD-8185 EMD-8188 EMD-8191 EMD-8192 EMD-8193 EMD-8194 EMD-8200 EMD-8215 EMD-8240 EMD-8242 EMD-8277 EMD-8289 EMD-8315 EMD-8331 EMD-8354 EMD-8399 EMD-8409 EMD-8414 EMD-8454 EMD-8461 EMD-8467 EMD-8469 EMD-8477 EMD-8478 EMD-8479 EMD-8481 EMD-8482 EMD-8506 EMD-8511 EMD-8512 EMD-8516 EMD-8519 EMD-8539 EMD-8540 EMD-8559 EMD-8560 EMD-8561 EMD-8562 EMD-8563 EMD-8564 EMD-8585 EMD-8586 EMD-8608 EMD-8622 EMD-8623 EMD-8632 EMD-8633 EMD-8637 EMD-8642 EMD-8643 EMD-8650 EMD-8651 EMD-8652 EMD-8653 EMD-8658 EMD-8659 EMD-8672 EMD-8697 EMD-8702 EMD-8708 EMD-8721 EMD-8744 EMD-8745 EMD-8746 EMD-8751 EMD-8764 EMD-8771 EMD-8774 EMD-8775 EMD-8776 EMD-8778 EMD-8782 EMD-8786 EMD-8787 EMD-8788 EMD-8789 EMD-8790 EMD-8794 EMD-8795 EMD-8827 EMD-8840 EMD-8841 EMD-8860 EMD-8881 EMD-8882 EMD-9400 EMD-9513 EMD-9514 EMD-9515 EMD-9517 EMD-9525 EMD-9535 EMD-9540 EMD-9541 EMD-9570 EMD-9571 EMD-9572

EMRinger Score & Reported Resolution

http://fraserlab.com/2015/02/18/EMringer/
EMD-1641 EMD-2677 EMD-2924 EMD-2974 EMD-2981 EMD-2984 EMD-3061 EMD-3062 EMD-3063 EMD-3121 EMD-3179 EMD-3180 EMD-3231 EMD-3237 EMD-3238 EMD-3239 EMD-3295 EMD-3296 EMD-3297 EMD-3298 EMD-3299 EMD-3308 EMD-3309 EMD-3338 EMD-3366 EMD-3385 EMD-3388 EMD-3460 EMD-3488 EMD-3523 EMD-3524 EMD-3583 EMD-3595 EMD-4015 EMD-4032 EMD-4038 EMD-4040 EMD-4061 EMD-4068 EMD-4073 EMD-4077 EMD-4080 EMD-4088 EMD-5391 EMD-5623 EMD-5776 EMD-5777 EMD-5778 EMD-5995 EMD-6204 EMD-6219 EMD-6225 EMD-6239 EMD-6240 EMD-6267 EMD-6272 EMD-6287 EMD-6324 EMD-6337 EMD-6338 EMD-6343 EMD-6344 EMD-6345 EMD-6346 EMD-6369 EMD-6408 EMD-6425 EMD-6455 EMD-6458 EMD-6475 EMD-6479 EMD-6480 EMD-6481 EMD-6526 EMD-6534 EMD-6535 EMD-6536 EMD-6551 EMD-6580 EMD-6630 EMD-6631 EMD-6632 EMD-6633 EMD-6634 EMD-6635 EMD-6640 EMD-6656 EMD-6668 EMD-6675 EMD-6676 EMD-6677 EMD-6698 EMD-6703 EMD-6704 EMD-6705 EMD-6706 EMD-6707 EMD-8015 EMD-8069 EMD-8072 EMD-8117 EMD-8118 EMD-8119 EMD-8162 EMD-8163 EMD-8164 EMD-8165 EMD-8185 EMD-8188 EMD-8191 EMD-8192 EMD-8193 EMD-8194 EMD-8200 EMD-8215 EMD-8240 EMD-8242 EMD-8289 EMD-8315 EMD-8331 EMD-8354 EMD-8399 EMD-8409 EMD-8414 EMD-8454 EMD-8461 EMD-8479 EMD-8482 EMD-8511 EMD-8512 EMD-8516 EMD-8559 EMD-8560 EMD-8608 EMD-8623 EMD-8632 EMD-8643 EMD-8650 EMD-8651 EMD-8652 EMD-9513 EMD-9514 EMD-9515 EMD-9535 EMD-9540 EMD-9541 EMD-9570 EMD-9571
EMD-1641 EMD-2677 EMD-2924 EMD-2974 EMD-2981 EMD-2984 EMD-3061 EMD-3062 EMD-3063 EMD-3121 EMD-3179 EMD-3180 EMD-3231 EMD-3237 EMD-3238 EMD-3239 EMD-3295 EMD-3296 EMD-3297 EMD-3298 EMD-3299 EMD-3308 EMD-3309 EMD-3338 EMD-3366 EMD-3385 EMD-3388 EMD-3460 EMD-3488 EMD-3523 EMD-3524 EMD-3583 EMD-3595 EMD-4015 EMD-4032 EMD-4038 EMD-4040 EMD-4061 EMD-4068 EMD-4073 EMD-4077 EMD-4080 EMD-4088 EMD-5391 EMD-5623 EMD-5776 EMD-5777 EMD-5778 EMD-5995 EMD-6204 EMD-6219 EMD-6225 EMD-6239 EMD-6240 EMD-6267 EMD-6272 EMD-6287 EMD-6324 EMD-6337 EMD-6338 EMD-6343 EMD-6344 EMD-6345 EMD-6346 EMD-6369 EMD-6408 EMD-6425 EMD-6455 EMD-6458 EMD-6475 EMD-6479 EMD-6480 EMD-6481 EMD-6526 EMD-6534 EMD-6535 EMD-6536 EMD-6551 EMD-6580 EMD-6630 EMD-6631 EMD-6632 EMD-6633 EMD-6634 EMD-6635 EMD-6640 EMD-6656 EMD-6668 EMD-6675 EMD-6676 EMD-6677 EMD-6698 EMD-6703 EMD-6704 EMD-6705 EMD-6706 EMD-6707 EMD-8015 EMD-8069 EMD-8072 EMD-8117 EMD-8118 EMD-8119 EMD-8162 EMD-8163 EMD-8164 EMD-8165 EMD-8185 EMD-8188 EMD-8191 EMD-8192 EMD-8193 EMD-8194 EMD-8200 EMD-8215 EMD-8240 EMD-8242 EMD-8289 EMD-8315 EMD-8331 EMD-8354 EMD-8399 EMD-8409 EMD-8414 EMD-8454 EMD-8461 EMD-8479 EMD-8482 EMD-8511 EMD-8512 EMD-8516 EMD-8559 EMD-8560 EMD-8608 EMD-8623 EMD-8632 EMD-8643 EMD-8650 EMD-8651 EMD-8652 EMD-9513 EMD-9514 EMD-9515 EMD-9535 EMD-9540 EMD-9541 EMD-9570 EMD-9571

Contact

Please send questions/comments/requests/hate mail to:

glander@scripps.edu